Insights

Payroll, VAT & Tax Filing in Nepal – A Guide for Foreign Business Owners

Written by Vijay Shrestha | May 29, 2025 5:33:38 AM

Nepal’s strategic location, young workforce, and emerging sectors make it an increasingly attractive destination for international businesses. Thanks to streamlined reforms under the Foreign Investment and Technology Transfer Act (FITTA) 2019, foreign company registration in Nepal has become faster and easier. However, many foreign businesses overlook a critical area that can lead to non-compliance, penalties, or even license suspension: payroll, VAT, and tax filing obligations.

Understanding Nepal’s tax landscape is vital—not only for legal compliance, but also for operational efficiency and business credibility. This comprehensive guide is designed to help foreign business owners navigate Nepal’s payroll regulations, Value Added Tax (VAT) requirements, and corporate tax filing rules.

Section 1: Payroll Compliance in Nepal

Once your foreign-owned company hires employees in Nepal—whether locals or expatriates—you must register for and manage payroll in accordance with Nepalese labor, tax, and social security laws.

1.1 Key Payroll Components

Your monthly payroll must comply with the following deductions and contributions:

Component Rate Paid By
Income Tax (TDS) Progressive (1–36%) Employee
Social Security Fund (SSF) 20% (11% employee, 9% employer) Both
Provident Fund (EPF/NPF) 10% employee + 10% employer Both (if opted)
Gratuity (Retirement Savings) 8.33% of basic salary Employer
Festival Allowance 8.33% of annual salary Employer

1.2 Registration Requirements

  • All employers must register with the Social Security Fund (SSF) once they hire staff.

  • Employees must be enrolled within 15 days of joining.

  • The company must also register for tax deduction at source (TDS) with the Inland Revenue Department (IRD) to legally deduct and deposit payroll taxes.

1.3 Monthly Payroll Deadlines

Task Due Date
Pay Salary By end of the month
Deposit TDS Within 25 days of following month
Submit SSF Contributions Within 15 days of following month
Submit Payroll Return Monthly (TDS & SSF portals)

Late submissions are penalized, and repeated non-compliance may trigger audits or suspension of business operations.

Section 2: VAT Registration & Compliance

Foreign companies operating in Nepal are required to register for VAT if their annual taxable turnover exceeds NPR 2 million. Even before reaching that threshold, voluntary registration is encouraged, especially for B2B services or import-export businesses.

2.1 Who Must Register for VAT?

You must register for VAT in Nepal if:

  • You sell goods or services exceeding NPR 2 million annually.

  • You import or export goods.

  • You work with government contracts or large vendors who require VAT invoices.

  • You are a foreign company providing consulting, digital services, or software locally.

2.2 How to Register for VAT

To register for VAT:

  1. Register the company with the Office of the Company Registrar (OCR).

  2. Obtain a Permanent Account Number (PAN) from the IRD.

  3. Apply online for VAT through the IRD Taxpayer Portal.

  4. Display a VAT registration certificate at the business location.

2.3 VAT Rates in Nepal

Category VAT Rate
Standard Goods & Services 13%
Exports 0% (Zero-rated)
Exempted Goods/Services No VAT

2.4 Filing VAT Returns

VAT returns must be filed:

  • Monthly if annual turnover is above NPR 10 million

  • Quarterly if below NPR 10 million

Filing Task Deadline
File VAT Return Within 25 days of the period-end
Deposit VAT Amount By the 25th day
Maintain Books Must retain VAT ledgers for 6 years

Invoices must be tax-compliant, with VAT registration numbers, serial numbers, and itemized values clearly shown.

Section 3: Tax Filing in Nepal for Foreign Companies

Every foreign-registered company in Nepal must file taxes and maintain books of account in line with Nepal’s Income Tax Act 2058, the Companies Act, and Inland Revenue regulations.

3.1 Key Corporate Tax Rates

Type of Business Corporate Tax Rate
Standard Private/Public Company 25%
Special Industries (e.g. manufacturing) 20%
Financial Institutions, Telecom, etc. 30%
Export-Oriented Businesses (SEZ) 0–15% (Concessional)

3.2 Taxable Income Includes:

  • Domestic operating income

  • Service income

  • Gains from sale of assets

  • Repatriated profits (if applicable)

Note: Branch offices are considered permanent establishments and taxed on Nepal-source income only.

3.3 Mandatory Filings for Companies

Filing Deadline
Advance Tax (Estimated) 3 installments (Poush, Chaitra, Ashad)
Annual Tax Return By end of Poush (mid-Jan) of the following fiscal year
Annual Financial Audit Report Within 3 months of fiscal year end
Tax Clearance Certificate Must be obtained annually to renew business licenses
TDS Returns Monthly, due within 25 days

Filing can be done via the IRD Taxpayer Portal and requires a digital signature certificate (DSC) for verification.

Section 4: Withholding Tax (TDS) System in Nepal

Nepal uses a Tax Deducted at Source (TDS) mechanism. Foreign companies must deduct TDS at source when paying vendors, employees, service providers, and consultants.

4.1 TDS Rates Snapshot

Transaction Type TDS Rate
Salary/Wages 1–36% (slab-based)
Rent (office, equipment) 10%
Consultancy / Technical Services 15%
Contractor / Subcontractor (business) 1.5%
Royalty / License Fee 15%
Interest to Non-Resident 15%
Dividend Distribution 5%

TDS must be deposited within 25 days of the following month and accompanied by monthly TDS returns.

Section 5: Fiscal Year and Deadlines

Nepal’s official fiscal year runs from Shrawan 1 to Ashad end (mid-July to mid-July). All reporting obligations are tied to this cycle.

Key Compliance Calendar for Foreign Companies

Task Due By
VAT Return 25th of every month/quarter
TDS Return 25th of following month
Advance Tax Installments Poush, Chaitra, Ashad
Annual Tax Return End of Poush (mid-Jan)
Financial Statement Submission 3 months from fiscal year-end
SSF Contributions 15th of following month

Section 6: Important Payroll and Tax Software in Nepal

Foreign companies operating in Nepal often use local accounting and payroll software to stay compliant:

  • Swastik – End-to-end accounting, payroll, VAT, and reporting

  • Tally Nepal – Indian system localized for Nepalese taxes

  • BizHub ERP – Payroll, inventory, taxation, and more

  • SSF Portal – For social security filings and payments

These systems can integrate directly with IRD portals, reducing manual data entry and compliance errors.

Section 7: Penalties for Non-Compliance

Non-Compliance Area Penalty Description
Late VAT Filing NPR 1,000/month (individual), NPR 100/day (company)
Late TDS Deposit Penalty + 15% interest + disallowance of expenses
Unregistered Employer Fines + disqualification for contracts/tenders
Non-payment of SSF Legal action + denial of tax clearance
Underreporting Income 25%–100% of tax shortfall as penalty

Foreign companies must conduct periodic compliance checks with their accounting teams or external tax advisors.

Section 8: Tax Benefits for Foreign Investors

While Nepal’s tax laws impose several obligations, the country also offers notable incentives for foreign investors:

  • Tax holidays for hydropower, manufacturing, and tourism sectors

  • 50–100% corporate tax exemption in Special Economic Zones (SEZs)

  • 5% dividend withholding tax (low compared to regional peers)

  • Double taxation treaties with over 10 countries

  • Repatriation of profits and capital allowed in foreign currency (after tax clearance)

These benefits can significantly reduce the effective tax burden for compliant and well-structured foreign ventures.

Section 9: Tips for Smooth Compliance

  1. Hire a Local Chartered Accountant (CA): Ensure your firm is registered with ICAN and understands NFRS.

  2. Automate with Software: Use integrated payroll and tax platforms to reduce human error.

  3. Stay Ahead of Deadlines: Set calendar alerts monthly and quarterly.

  4. Audit Ready Books: Maintain clean records for tax and audit reviews.

  5. Cross-Check TDS Returns: Errors in TDS cause major penalties and disputes.

  6. Use Tax Clearance Certificates Proactively: Required for profit repatriation, visa renewals, and project bidding.

Conclusion: Stay Compliant and Focus on Growth

Nepal offers significant business opportunities for foreign investors—but the cost of ignoring payroll, VAT, and tax obligations can be high. Whether you’re setting up a software development center, manufacturing unit, or tourism venture, understanding Nepal’s tax framework is essential.

From employee benefits to VAT returns and tax clearances, foreign companies must operate with full awareness of regulatory expectations. With the right systems, advisors, and proactive planning, compliance in Nepal is not only manageable—it becomes a competitive advantage.

If you're planning foreign company registration in Nepal, treat accounting and taxation not as afterthoughts, but as strategic pillars of sustainable success.